Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ncs2 family permease | D3C88_11575 | Not Available | Negative | 1671552 - 1671870 | 11600.8 |
| zinc/cadmium/mercury/lead-transporting atpase | D3C88_11580 | Not Available | Negative | 1671871 - 1672444 | 20180.7 |
| polynucleotide adenylyltransferase pcnb | D3C88_11585 | Not Available | Negative | 1672445 - 1673197 | 28539.3 |
| acetyltransferase | D3C88_11590 | Not Available | Negative | 1673280 - 1673495 | 8072.59 |
| hypothetical protein | D3C88_11600 | Not Available | Negative | 1673829 - 1674614 | 30520.2 |
| peptidase m35 | D3C88_11605 | Not Available | Negative | 1674667 - 1675464 | 31017.0 |
| type vi secretion system tip protein vgrg | D3C88_11610 | Not Available | Negative | 1675418 - 1676699 | 46768.9 |
| para family protein | D3C88_11615 | Not Available | Positive | 1677444 - 1678076 | 22399.8 |
| hypothetical protein | D3C88_11620 | Not Available | Positive | 1678247 - 1678450 | 7735.2 |
| stba family protein | D3C88_11625 | Not Available | Positive | 1678689 - 1679663 | 35728.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





