Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate:gamma-aminobutyrate antiporter | D3C88_11525 | Not Available | Positive | 1663087 - 1664622 | 55094.0 |
| glycoside hydrolase family 10 protein | D3C88_11530 | Not Available | Positive | 1664753 - 1665862 | 41856.6 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | D3C88_11535 | Not Available | Negative | 1665863 - 1666474 | 22780.6 |
| atp-dependent helicase hrpb | D3C88_11540 | Not Available | Positive | 1666727 - 1668076 | 50278.6 |
| type ii secretion system protein gspc | D3C88_11545 | Not Available | Positive | 1668153 - 1668614 | 16673.1 |
| gamma-glutamylcyclotransferase | D3C88_11550 | Not Available | Negative | 1668615 - 1669199 | 21633.9 |
| cation transport regulator chab | D3C88_11555 | Not Available | Negative | 1669357 - 1669587 | 8945.18 |
| sodium-potassium/proton antiporter chaa | D3C88_11560 | Not Available | Positive | 1669857 - 1670689 | 29780.1 |
| host specificity protein j | D3C88_11565 | Not Available | Positive | 1670690 - 1671270 | 20758.6 |
| duf1198 family protein | D3C88_11570 | Not Available | Negative | 1671314 - 1671499 | 6993.77 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





