Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsx | D3C88_11480 | Not Available | Negative | 1657800 - 1658571 | 28285.1 |
| Trna-pseudo | Not Available | Not Available | Positive | 1658931 - 1659007 | Not Available |
| atp-binding cassette domain-containing protein | D3C88_11485 | Not Available | Negative | 1658564 - 1658947 | 13682.5 |
| duf2501 domain-containing protein | D3C88_11490 | Not Available | Negative | 1659411 - 1659905 | 17353.6 |
| dna replication protein dnac | D3C88_11495 | Not Available | Negative | 1659954 - 1660691 | 27936.8 |
| primosomal protein 1 | D3C88_11500 | Not Available | Negative | 1660694 - 1661233 | 19456.2 |
| threonine/serine exporter | D3C88_11505 | Not Available | Negative | 1661341 - 1661814 | 17085.6 |
| hypothetical protein | D3C88_11510 | Not Available | Negative | 1661805 - 1662003 | 6805.68 |
| multidrug abc transporter permease/atp-binding protein | D3C88_11515 | Not Available | Negative | 1662004 - 1662555 | 20010.1 |
| hypothetical protein | D3C88_11520 | Not Available | Negative | 1662548 - 1662871 | 12064.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





