Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit e | D3C88_11430 | Not Available | Positive | 1652599 - 1653099 | 18591.1 |
| nadh-quinone oxidoreductase subunit nuof | D3C88_11435 | Not Available | Positive | 1653096 - 1654282 | 43731.6 |
| type iv toxin-antitoxin system yeeu family antitoxin | D3C88_11440 | Not Available | Negative | 1654410 - 1654574 | 6033.37 |
| n-acetylmuramic acid 6-phosphate etherase | D3C88_11445 | Not Available | Positive | 1654575 - 1654886 | 11078.7 |
| flap endonuclease xni | D3C88_11450 | Not Available | Positive | 1654914 - 1655291 | 14332.3 |
| lactaldehyde reductase | D3C88_11455 | Not Available | Negative | 1655396 - 1655514 | 4182.83 |
| dnaa regulatory inactivator hda | D3C88_11460 | Not Available | Negative | 1655515 - 1655630 | 4525.37 |
| uracil/xanthine transporter | D3C88_11465 | Not Available | Negative | 1655680 - 1656969 | 45095.1 |
| uracil phosphoribosyltransferase | D3C88_11470 | Not Available | Negative | 1657055 - 1657538 | 17040.9 |
| lytic transglycosylase domain-containing protein | D3C88_11475 | Not Available | Negative | 1657539 - 1657798 | 10110.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





