Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3C88_11275 | Not Available | Negative | 1630160 - 1630354 | 7164.66 |
| pts mannose transporter subunit iiab | D3C88_11280 | Not Available | Positive | 1630325 - 1630650 | 11957.3 |
| pts glucose transporter subunit iibc | D3C88_11285 | Not Available | Positive | 1630651 - 1631604 | 34045.6 |
| ferric-rhodotorulic acid/ferric-coprogen receptor fhue | D3C88_11290 | Not Available | Negative | 1631664 - 1633251 | 59454.5 |
| carbamoyl-phosphate synthase large subunit | D3C88_11295 | Not Available | Negative | 1633252 - 1633546 | 10746.1 |
| carbamoyl-phosphate synthase small subunit | D3C88_11300 | Not Available | Negative | 1633564 - 1634712 | 41417.4 |
| hypothetical protein | D3C88_11305 | Not Available | Negative | 1634865 - 1635062 | 7566.71 |
| 3-isopropylmalate dehydrogenase | D3C88_11310 | Not Available | Negative | 1635125 - 1635531 | 14655.7 |
| 2-isopropylmalate synthase | D3C88_11315 | Not Available | Negative | 1635531 - 1636254 | 26517.0 |
| hth-type transcriptional regulator galr | D3C88_11320 | Not Available | Positive | 1636928 - 1637959 | 37136.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





