Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | D3C88_11225 | Not Available | Negative | 1622503 - 1622701 | 7262.64 |
| patatin family protein | D3C88_11230 | Not Available | Negative | 1622698 - 1623771 | 39860.2 |
| duf1328 domain-containing protein | D3C88_11235 | Not Available | Negative | 1623893 - 1624072 | 6238.2 |
| molecular chaperone osmy | D3C88_11240 | Not Available | Negative | 1624181 - 1624786 | 21074.8 |
| peptide chain release factor 3 | D3C88_11245 | Not Available | Negative | 1625179 - 1626434 | 47086.5 |
| multidrug transporter | D3C88_11250 | Not Available | Negative | 1626435 - 1626646 | 7565.63 |
| multidrug efflux rnd transporter permease subunit mdtb | D3C88_11255 | Not Available | Negative | 1626647 - 1627553 | 32546.3 |
| eal domain-containing protein | D3C88_11260 | Not Available | Positive | 1627554 - 1628302 | 28321.3 |
| terc family protein | D3C88_11265 | Not Available | Negative | 1628306 - 1629862 | 56531.5 |
| hypothetical protein | D3C88_11270 | Not Available | Negative | 1629850 - 1630059 | 8020.69 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





