Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sorbose transporter subunit iia | D3C88_11175 | Not Available | Positive | 1617107 - 1617438 | 11975.6 |
| recombinase | D3C88_11180 | Not Available | Negative | 1617439 - 1617553 | 4143.95 |
| ethanolamine utilization microcompartment protein eutn | D3C88_11185 | Not Available | Negative | 1617565 - 1617850 | 9825.89 |
| hypothetical protein | D3C88_11190 | Not Available | Negative | 1617851 - 1618255 | 15742.3 |
| d-lactate dehydrogenase | D3C88_11195 | Not Available | Positive | 1618489 - 1619944 | 55362.8 |
| d-alanyl-d-alanine endopeptidase | D3C88_11200 | Not Available | Negative | 1619983 - 1620915 | 33917.4 |
| duf1282 domain-containing protein | D3C88_11205 | Not Available | Negative | 1621089 - 1621362 | 9804.36 |
| nadh-quinone oxidoreductase subunit nuob | D3C88_11210 | Not Available | Positive | 1621363 - 1621746 | 13581.5 |
| type vi secretion system lipoprotein tssj | D3C88_11215 | Not Available | Positive | 1621747 - 1621981 | 8899.52 |
| type vi secretion system baseplate subunit tssk | D3C88_11220 | Not Available | Positive | 1621984 - 1622502 | 19380.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





