Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnaa inactivator hda | D3C88_11115 | Not Available | Negative | 1612213 - 1612914 | 26634.2 |
| enoyl-coa hydratase/isomerase family protein | D3C88_11120 | Not Available | Positive | 1612922 - 1613388 | 17206.2 |
| protease ftsh-inhibitory lysogeny factor ciii | D3C88_11130 | Not Available | Positive | 1614141 - 1614272 | 4910.23 |
| host cell division inhibitory peptide kil | D3C88_11135 | Not Available | Positive | 1614257 - 1614409 | 5886.32 |
| recombinase | D3C88_11140 | Not Available | Positive | 1614666 - 1615271 | 22323.1 |
| hypothetical protein | D3C88_11145 | Not Available | Positive | 1615271 - 1615654 | 14175.4 |
| duf2856 family protein | D3C88_11150 | Not Available | Positive | 1615678 - 1615974 | 11835.9 |
| hypothetical protein | D3C88_11160 | Not Available | Positive | 1616069 - 1616587 | 19170.5 |
| hypothetical protein | D3C88_11165 | Not Available | Positive | 1616584 - 1616876 | 11308.6 |
| sdr family oxidoreductase | D3C88_11170 | Not Available | Positive | 1616877 - 1617097 | 7891.36 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





