Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | D3C88_10870 | Not Available | Negative | 1575203 - 1575505 | 10956.5 |
| conjugal transfer protein | D3C88_10875 | Not Available | Negative | 1575502 - 1575915 | 15975.2 |
| conjugal transfer protein trag | D3C88_10880 | Not Available | Negative | 1575912 - 1577753 | 69647.6 |
| p-type dna transfer atpase virb11 | D3C88_10885 | Not Available | Negative | 1577750 - 1578781 | 39100.5 |
| trbi/virb10 family protein | D3C88_10890 | Not Available | Negative | 1578783 - 1579988 | 43270.1 |
| conjugal transfer protein | D3C88_10895 | Not Available | Negative | 1579985 - 1580914 | 35118.6 |
| pilus assembly protein | D3C88_10900 | Not Available | Negative | 1580919 - 1581632 | 26938.1 |
| type iv secretion system protein | D3C88_10905 | Not Available | Negative | 1581878 - 1583011 | 39872.8 |
| hypothetical protein | D3C88_10910 | Not Available | Negative | 1583021 - 1583248 | 8449.1 |
| pilus assembly protein | D3C88_10915 | Not Available | Negative | 1583249 - 1584007 | 28639.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





