Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tn3-like element tn3 family transposase | D3C88_10820 | Not Available | Negative | 1564553 - 1566627 | 78427.4 |
| recombinase family protein | D3C88_10825 | Not Available | Positive | 1566789 - 1567346 | 20604.8 |
| class a broad-spectrum beta-lactamase tem-1 | D3C88_10830 | Not Available | Positive | 1567529 - 1568389 | 31517.0 |
| hypothetical protein | D3C88_10835 | Not Available | Positive | 1568834 - 1569625 | 31376.2 |
| hypothetical protein | D3C88_10840 | Not Available | Positive | 1569676 - 1571001 | 51253.0 |
| methionyl-trna formyltransferase | D3C88_10845 | Not Available | Negative | 1571177 - 1571440 | 9856.56 |
| dna-binding protein | D3C88_10850 | Not Available | Negative | 1571491 - 1571952 | 17772.0 |
| hemolysin expression modulator hha | D3C88_10855 | Not Available | Negative | 1571968 - 1572174 | 8176.88 |
| type ia dna topoisomerase | D3C88_10860 | Not Available | Negative | 1572171 - 1574324 | 79193.7 |
| dna topoisomerase iii | D3C88_10865 | Not Available | Negative | 1574329 - 1574904 | 21803.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





