Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 1538967 - 1539038 | Not Available |
| biotin synthase | D3C88_10615 | Not Available | Negative | 1539031 - 1539419 | 14858.0 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | D3C88_10620 | Not Available | Positive | 1539506 - 1540170 | 24555.5 |
| ribosome-associated protein ybcj | D3C88_10625 | Not Available | Negative | 1540294 - 1540506 | 7389.95 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | D3C88_10630 | Not Available | Negative | 1540508 - 1541374 | 30957.5 |
| hypothetical protein | D3C88_10635 | Not Available | Positive | 1541424 - 1541612 | 7389.04 |
| Trna-arg | Not Available | Not Available | Positive | 1541645 - 1541721 | Not Available |
| rraa family protein | D3C88_10650 | Not Available | Negative | 1541963 - 1542331 | 13265.7 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | D3C88_10655 | Not Available | Negative | 1542424 - 1543350 | 33538.0 |
| hslu--hslv peptidase atpase subunit | D3C88_10660 | Not Available | Negative | 1543417 - 1544748 | 49583.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





