Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3C88_10295 | Not Available | Negative | 1501017 - 1501337 | 11648.3 |
| dna-packaging protein | D3C88_10300 | Not Available | Positive | 1501272 - 1501470 | 7381.71 |
| nitrite reductase large subunit | D3C88_10305 | Not Available | Positive | 1501471 - 1502819 | 49478.4 |
| nitrite reductase small subunit | D3C88_10310 | Not Available | Positive | 1502816 - 1503142 | 12270.6 |
| nitrite transporter nirc | D3C88_10315 | Not Available | Positive | 1503268 - 1503750 | 16739.8 |
| aconitate hydratase b | D3C88_10320 | Not Available | Negative | 1503751 - 1504414 | 23962.7 |
| aconitate hydratase | D3C88_10325 | Not Available | Negative | 1504395 - 1504511 | 4750.45 |
| duf3300 domain-containing protein | D3C88_10335 | Not Available | Positive | 1504769 - 1506526 | 65354.6 |
| dihydrolipoamide dehydrogenase | D3C88_10340 | Not Available | Negative | 1506768 - 1507009 | 8278.02 |
| hypothetical protein | D3C88_10345 | Not Available | Negative | 1507010 - 1507119 | 3718.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





