Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional metallophosphatase/5'-nucleotidase | D3C88_10245 | Not Available | Negative | 1490598 - 1492151 | 56557.7 |
| cytoplasmic protein | D3C88_10250 | Not Available | Positive | 1492284 - 1493408 | 42940.0 |
| bifunctional metallophosphatase/5'-nucleotidase | D3C88_10255 | Not Available | Positive | 1493641 - 1495191 | 56367.6 |
| bifunctional metallophosphatase/5'-nucleotidase | D3C88_10260 | Not Available | Positive | 1495232 - 1496851 | 59234.6 |
| nucleoside-specific channel-forming protein tsx | D3C88_10265 | Not Available | Positive | 1496928 - 1497788 | 32978.6 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | D3C88_10270 | Not Available | Negative | 1498006 - 1499055 | 38748.5 |
| lysis protein | D3C88_10275 | Not Available | Positive | 1499060 - 1499521 | 17138.6 |
| increased serum survival lipoprotein iss | D3C88_10280 | Not Available | Negative | 1499553 - 1499846 | 10413.8 |
| tonb family protein | D3C88_10285 | Not Available | Positive | 1500273 - 1500653 | 14585.1 |
| hypothetical protein | D3C88_10290 | Not Available | Negative | 1500776 - 1501129 | 13433.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





