Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ureidoglycolate dehydrogenase | D3C88_09680 | Not Available | Negative | 1410559 - 1411608 | 37933.3 |
| acyl-coa synthetase fdra | D3C88_09685 | Not Available | Positive | 1411925 - 1413126 | 42317.8 |
| serine protease | D3C88_09690 | Not Available | Negative | 1413127 - 1413370 | 8492.15 |
| nickel abc transporter permease subunit nikc | D3C88_09695 | Not Available | Negative | 1413371 - 1414106 | 26685.4 |
| solute:sodium symporter family transporter | D3C88_09700 | Not Available | Negative | 1414131 - 1414782 | 22681.4 |
| scaffolding protein | D3C88_09705 | Not Available | Negative | 1414783 - 1414957 | 6364.62 |
| portal protein | D3C88_09710 | Not Available | Negative | 1415048 - 1416438 | 50564.3 |
| pyridoxamine 5'-phosphate oxidase | D3C88_09715 | Not Available | Negative | 1416439 - 1416997 | 21597.0 |
| c-type lysozyme inhibitor | D3C88_09720 | Not Available | Negative | 1417056 - 1417385 | 12561.2 |
| anhydro-n-acetylmuramic acid kinase | D3C88_09725 | Not Available | Negative | 1417483 - 1417660 | 5856.86 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





