Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wyl domain-containing protein | D3C88_09625 | Not Available | Negative | 1404894 - 1405214 | 12373.2 |
| flagellar hook-basal body complex protein flie | D3C88_09630 | Not Available | Positive | 1405215 - 1405455 | 8582.41 |
| integrase | D3C88_09640 | Not Available | Negative | 1405544 - 1405723 | 6849.45 |
| multidrug smr transporter | D3C88_09645 | Not Available | Positive | 1405800 - 1406132 | 11915.0 |
| kinase inhibitor | D3C88_09650 | Not Available | Positive | 1406301 - 1406852 | 19421.8 |
| arac family transcriptional regulator | D3C88_09655 | Not Available | Positive | 1406862 - 1407659 | 30827.5 |
| hypothetical protein | D3C88_09660 | Not Available | Negative | 1407816 - 1408049 | 8772.86 |
| porin | D3C88_09665 | Not Available | Negative | 1408161 - 1409020 | 31551.9 |
| s-ureidoglycine aminohydrolase | D3C88_09670 | Not Available | Negative | 1409021 - 1409291 | 9661.53 |
| allantoate amidohydrolase | D3C88_09675 | Not Available | Negative | 1409302 - 1410537 | 45602.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





