Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | D3C88_09575 | Not Available | Positive | 1395019 - 1395878 | 31134.2 |
| atp-binding cassette domain-containing protein | D3C88_09580 | Not Available | Positive | 1396030 - 1396405 | 13722.5 |
| nadh-quinone oxidoreductase subunit nuon | D3C88_09585 | Not Available | Negative | 1396406 - 1397328 | 33087.3 |
| ncs2 family permease | D3C88_09590 | Not Available | Positive | 1397329 - 1398414 | 36833.3 |
| na+/h+ antiporter | D3C88_09595 | Not Available | Positive | 1398565 - 1399368 | 28654.4 |
| multidrug transporter subunit mdto | D3C88_09600 | Not Available | Positive | 1399369 - 1401036 | 62457.0 |
| o-succinylbenzoate synthase | D3C88_09605 | Not Available | Positive | 1401037 - 1401220 | 6539.93 |
| o-succinylbenzoate--coa ligase | D3C88_09610 | Not Available | Positive | 1401217 - 1402235 | 37419.1 |
| methionine synthase | D3C88_09615 | Not Available | Positive | 1402236 - 1403575 | 49952.7 |
| rata-like protein | D3C88_09620 | Not Available | Negative | 1403576 - 1404893 | 47224.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





