Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna glutamyl-q(34) synthetase gluqrs | D3C88_09525 | Not Available | Positive | 1386929 - 1387535 | 22525.8 |
| act domain-containing protein | D3C88_09530 | Not Available | Positive | 1387614 - 1388388 | 28620.2 |
| mazf-maze toxin-antitoxin system antitoxin maze | D3C88_09535 | Not Available | Positive | 1388466 - 1388714 | 9356.24 |
| endoribonuclease mazf | D3C88_09540 | Not Available | Positive | 1388714 - 1389049 | 12068.6 |
| nucleoside triphosphate pyrophosphohydrolase | D3C88_09545 | Not Available | Positive | 1389121 - 1389564 | 17117.1 |
| biosynthetic arginine decarboxylase | D3C88_09550 | Not Available | Positive | 1389565 - 1390979 | 52806.3 |
| hypothetical protein | D3C88_09555 | Not Available | Positive | 1391125 - 1391725 | 21926.6 |
| nupc/nupg family nucleoside cnt transporter | D3C88_09560 | Not Available | Positive | 1391726 - 1392774 | 36263.0 |
| transcriptional regulator yeil | D3C88_09565 | Not Available | Negative | 1392841 - 1393539 | 26914.8 |
| pyrimidine-specific ribonucleoside hydrolase rihb | D3C88_09570 | Not Available | Positive | 1393669 - 1394610 | 33777.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





