Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase pepe | D3C88_09470 | Not Available | Negative | 1379115 - 1379525 | 14535.7 |
| l-sorbose 1-phosphate reductase | D3C88_09475 | Not Available | Negative | 1379907 - 1381136 | 44671.1 |
| pts mannose transporter subunit iid | D3C88_09480 | Not Available | Negative | 1381188 - 1381924 | 25811.4 |
| dna-binding response regulator | D3C88_09485 | Not Available | Negative | 1381925 - 1382356 | 16506.8 |
| sensor histidine kinase | D3C88_09490 | Not Available | Negative | 1382371 - 1383574 | 44634.2 |
| endonuclease smrb | D3C88_09495 | Not Available | Positive | 1383575 - 1383768 | 7185.78 |
| duf2544 domain-containing protein | D3C88_09505 | Not Available | Negative | 1384088 - 1384930 | 30927.8 |
| fimbrial protein | D3C88_09510 | Not Available | Negative | 1384932 - 1385339 | 14431.0 |
| putative lateral flagellar export/assembly protein lafu | D3C88_09515 | Not Available | Negative | 1385440 - 1386225 | 28891.0 |
| flagellar biosynthesis protein flha | D3C88_09520 | Not Available | Positive | 1386170 - 1386928 | 27313.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





