Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6 | D3C88_09260 | Not Available | Negative | 1349363 - 1349490 | 4999.97 |
| duf1471 domain-containing protein | D3C88_09265 | Not Available | Positive | 1349818 - 1350093 | 10149.9 |
| l-ribulose-5-phosphate 4-epimerase | D3C88_09270 | Not Available | Negative | 1350222 - 1350887 | 24486.1 |
| ribonuclease r | D3C88_09275 | Not Available | Negative | 1350892 - 1352930 | 77260.6 |
| transcriptional regulator | D3C88_09280 | Not Available | Negative | 1352969 - 1353394 | 15594.0 |
| adenylosuccinate synthetase | D3C88_09285 | Not Available | Negative | 1353599 - 1354897 | 47347.7 |
| duf2065 domain-containing protein | D3C88_09290 | Not Available | Negative | 1355001 - 1355198 | 7166.26 |
| protease modulator hflc | D3C88_09295 | Not Available | Negative | 1355280 - 1356284 | 37652.0 |
| ftsh protease activity modulator hflk | D3C88_09300 | Not Available | Negative | 1356287 - 1357546 | 45578.5 |
| host specificity protein j | D3C88_09305 | Not Available | Negative | 1357638 - 1357924 | 10312.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





