Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | D3C88_09150 | Not Available | Negative | 1333334 - 1334370 | 37924.4 |
| atp-binding cassette domain-containing protein | D3C88_09155 | Not Available | Positive | 1334371 - 1334750 | 14006.0 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | D3C88_09160 | Not Available | Positive | 1335147 - 1336074 | 33787.7 |
| glutaminase | D3C88_09165 | Not Available | Positive | 1336075 - 1336627 | 19780.6 |
| ribosome silencing factor rsfs | D3C88_09170 | Not Available | Positive | 1336839 - 1337156 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | D3C88_09175 | Not Available | Positive | 1337160 - 1337627 | 17342.1 |
| penicillin-binding protein 2 | D3C88_09180 | Not Available | Positive | 1337658 - 1339559 | 70860.6 |
| rod shape-determining protein roda | D3C88_09185 | Not Available | Positive | 1339562 - 1340674 | 40492.6 |
| endolytic peptidoglycan transglycosylase rlpa | D3C88_09190 | Not Available | Positive | 1340685 - 1341545 | 29420.5 |
| cell division protein zapc | D3C88_09195 | Not Available | Negative | 1341546 - 1341891 | 13636.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





