Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-f crispr-associated endonuclease cas1 | D3C88_09045 | Not Available | Negative | 1316277 - 1317260 | 36492.7 |
| atp-dependent clp protease atp-binding subunit clpa | D3C88_09050 | Not Available | Negative | 1318153 - 1320429 | 84211.9 |
| atp-dependent clp protease adaptor clps | D3C88_09055 | Not Available | Negative | 1320460 - 1320780 | 12179.7 |
| cold-shock protein cspd | D3C88_09060 | Not Available | Positive | 1321103 - 1321327 | 7969.41 |
| macrolide abc transporter atp-binding protein/permease macb | D3C88_09065 | Not Available | Negative | 1321400 - 1323346 | 70636.6 |
| macrolide transporter subunit maca | D3C88_09070 | Not Available | Negative | 1323343 - 1323642 | 10875.0 |
| dna primase | D3C88_09075 | Not Available | Positive | 1323643 - 1324306 | 24741.7 |
| hepn domain-containing protein | D3C88_09080 | Not Available | Negative | 1324698 - 1325411 | 28438.7 |
| peptidase | D3C88_09085 | Not Available | Positive | 1325764 - 1327677 | 69104.5 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | D3C88_09090 | Not Available | Positive | 1327754 - 1327935 | 6897.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





