Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | D3C88_08895 | Not Available | Positive | 1297083 - 1298318 | 45061.4 |
| beta-methylgalactoside transporter | D3C88_08900 | Not Available | Negative | 1298561 - 1298796 | 8180.23 |
| transcription-repair coupling factor | D3C88_08905 | Not Available | Positive | 1298797 - 1300726 | 72243.1 |
| hydrogenase-1 operon protein hyae | D3C88_08910 | Not Available | Positive | 1300727 - 1300968 | 8919.67 |
| hydrogenase expression/formation protein | D3C88_08915 | Not Available | Positive | 1300965 - 1301822 | 31373.4 |
| 8-oxo-dgtp diphosphatase mutt | D3C88_08920 | Not Available | Positive | 1302080 - 1302396 | 12371.7 |
| macrolide transporter subunit maca | D3C88_08925 | Not Available | Negative | 1302397 - 1302992 | 21963.9 |
| duf535 domain-containing protein | D3C88_08930 | Not Available | Positive | 1303107 - 1303355 | 9810.02 |
| preprotein translocase subunit secg | D3C88_08935 | Not Available | Negative | 1303356 - 1303518 | 5427.77 |
| phosphoglucosamine mutase | D3C88_08940 | Not Available | Negative | 1303746 - 1304303 | 19978.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





