Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3C88_08845 | Not Available | Positive | 1290607 - 1290822 | 8194.75 |
| dna adenine methylase | D3C88_08850 | Not Available | Positive | 1291014 - 1291778 | 29453.8 |
| helix-turn-helix domain-containing protein | D3C88_08855 | Not Available | Negative | 1291895 - 1292233 | 12471.2 |
| dna-binding protein | D3C88_08860 | Not Available | Positive | 1292334 - 1292522 | 7058.41 |
| iclr family transcriptional regulator | D3C88_08865 | Not Available | Positive | 1292575 - 1292883 | 10981.3 |
| duf3102 domain-containing protein | D3C88_08870 | Not Available | Positive | 1292894 - 1293656 | 28279.8 |
| cytidine deaminase | D3C88_08875 | Not Available | Positive | 1293662 - 1294546 | 31568.6 |
| protein sana | D3C88_08880 | Not Available | Positive | 1294696 - 1295415 | 27288.5 |
| duf2542 family protein | D3C88_08885 | Not Available | Positive | 1295418 - 1295657 | 9264.61 |
| nad(p)-dependent oxidoreductase | D3C88_08890 | Not Available | Positive | 1295851 - 1297089 | 44181.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





