Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| erythrose 4-phosphate dehydrogenase | D3C88_08735 | Not Available | Negative | 1278024 - 1278125 | 4043.79 |
| duf296 domain-containing protein | D3C88_08740 | Not Available | Positive | 1278442 - 1278560 | 4612.62 |
| colibactin polyketide synthase clbc | D3C88_08745 | Not Available | Positive | 1278561 - 1279372 | 29853.5 |
| deor/glpr transcriptional regulator | D3C88_08755 | Not Available | Positive | 1279936 - 1280718 | 29241.3 |
| iclr family transcriptional regulator | D3C88_08760 | Not Available | Positive | 1281021 - 1281809 | 29892.4 |
| dihydrodipicolinate synthase family protein | D3C88_08765 | Not Available | Positive | 1281784 - 1282218 | 15949.2 |
| dna repair protein radc | D3C88_08770 | Not Available | Negative | 1282219 - 1282439 | 7931.59 |
| multidrug transporter subunit mdtc | D3C88_08775 | Not Available | Negative | 1282440 - 1282813 | 13623.2 |
| l(+)-tartrate dehydratase subunit alpha | D3C88_08785 | Not Available | Positive | 1282915 - 1283826 | 32707.4 |
| multidrug resistance transporter | D3C88_08790 | Not Available | Positive | 1283842 - 1285082 | 44925.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





