Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D3C88_08420 | Not Available | Positive | 1234932 - 1235698 | 28483.8 |
| protease | D3C88_08425 | Not Available | Positive | 1235699 - 1235809 | 4090.81 |
| hypothetical protein | D3C88_08430 | Not Available | Negative | 1236309 - 1236626 | 11407.8 |
| lipid kinase yegs | D3C88_08435 | Not Available | Positive | 1237042 - 1237941 | 32019.6 |
| deor/glpr transcriptional regulator | D3C88_08440 | Not Available | Negative | 1238023 - 1238802 | 27946.9 |
| galactitol-1-phosphate 5-dehydrogenase | D3C88_08445 | Not Available | Negative | 1238902 - 1239942 | 37412.4 |
| pts galactitol transporter subunit iic | D3C88_08450 | Not Available | Negative | 1239990 - 1241345 | 48309.9 |
| pts galactitol transporter subunit iib | D3C88_08455 | Not Available | Negative | 1241349 - 1241633 | 10194.6 |
| pts galactitol transporter subunit iia | D3C88_08460 | Not Available | Negative | 1241664 - 1241979 | 11785.3 |
| nad(+) kinase | D3C88_08465 | Not Available | Positive | 1241980 - 1242698 | 26272.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





