Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine 5'-phosphate oxidase | D3C88_08320 | Not Available | Positive | 1219384 - 1219497 | 4610.37 |
| tyrosine--trna ligase | D3C88_08325 | Not Available | Positive | 1219626 - 1219844 | 7849.6 |
| autotransporter assembly complex protein tamb | D3C88_08330 | Not Available | Positive | 1219845 - 1221051 | 43081.3 |
| gamma-glutamylcyclotransferase ytfp | D3C88_08335 | Not Available | Positive | 1221054 - 1221395 | 12867.2 |
| inorganic pyrophosphatase | D3C88_08340 | Not Available | Negative | 1221775 - 1222305 | 19732.6 |
| abc transporter substrate-binding protein | D3C88_08345 | Not Available | Positive | 1222615 - 1223571 | 34284.5 |
| sugar abc transporter atp-binding protein | D3C88_08350 | Not Available | Positive | 1223711 - 1224531 | 30707.5 |
| rna polymerase-associated protein rapa | D3C88_08355 | Not Available | Negative | 1224532 - 1225802 | 48387.5 |
| dna polymerase ii | D3C88_08360 | Not Available | Negative | 1225966 - 1228317 | 90112.7 |
| l-ribulose-5-phosphate 4-epimerase arad | D3C88_08365 | Not Available | Negative | 1228392 - 1228852 | 16952.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





