Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase tatd | D3C88_08210 | Not Available | Negative | 1205076 - 1205504 | 16141.7 |
| guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | D3C88_08215 | Not Available | Negative | 1205505 - 1206229 | 27230.0 |
| duf1472 domain-containing protein | D3C88_08220 | Not Available | Positive | 1206230 - 1206292 | 2368.94 |
| antirestriction protein | D3C88_08225 | Not Available | Positive | 1206265 - 1206690 | 16144.2 |
| dna damage-inducible protein yebg | D3C88_08235 | Not Available | Negative | 1206934 - 1207224 | 10717.5 |
| formate-dependent phosphoribosylglycinamide formyltransferase | D3C88_08240 | Not Available | Positive | 1207358 - 1208026 | 24234.4 |
| prepilin peptidase | D3C88_08245 | Not Available | Positive | 1208027 - 1208729 | 25406.6 |
| hypothetical protein | D3C88_08250 | Not Available | Positive | 1208795 - 1209205 | 14686.8 |
| type ii secretion system protein gspc | D3C88_08255 | Not Available | Positive | 1209223 - 1209544 | 12776.7 |
| duf4092 domain-containing protein | D3C88_08260 | Not Available | Negative | 1209545 - 1212691 | 115539.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





