Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal-phosphate dependent enzyme | D3C88_08160 | Not Available | Negative | 1198663 - 1199137 | 17003.2 |
| fad-binding protein | D3C88_08165 | Not Available | Negative | 1199138 - 1199528 | 14149.6 |
| elongation factor p--(r)-beta-lysine ligase | D3C88_08170 | Not Available | Positive | 1199853 - 1200577 | 27870.2 |
| transcription-repair coupling factor | D3C88_08175 | Not Available | Positive | 1200812 - 1201002 | 6905.35 |
| hypothetical protein | D3C88_08180 | Not Available | Negative | 1201003 - 1201604 | 22886.4 |
| duf1481 domain-containing protein | D3C88_08185 | Not Available | Negative | 1201628 - 1202323 | 26352.9 |
| dna-binding protein hu-alpha | D3C88_08190 | Not Available | Negative | 1202336 - 1202608 | 9535.51 |
| duf416 family protein | D3C88_08195 | Not Available | Negative | 1202795 - 1203248 | 17136.2 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | D3C88_08200 | Not Available | Negative | 1203249 - 1204424 | 43799.0 |
| transcription/translation regulatory transformer protein rfah | D3C88_08205 | Not Available | Positive | 1204591 - 1205079 | 18357.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





