Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | D3C88_08050 | Not Available | Negative | 1184575 - 1185205 | 23409.4 |
| colanic acid exporter | D3C88_08055 | Not Available | Positive | 1185206 - 1185576 | 13430.6 |
| duf2002 family protein | D3C88_08060 | Not Available | Negative | 1185577 - 1185660 | 3184.88 |
| duf883 domain-containing protein | D3C88_08065 | Not Available | Positive | 1185812 - 1186138 | 11847.9 |
| apolipoprotein n-acyltransferase | D3C88_08070 | Not Available | Positive | 1186139 - 1186317 | 6578.11 |
| rhomboid family intramembrane serine protease | D3C88_08075 | Not Available | Negative | 1186444 - 1187172 | 26422.6 |
| glutathione s-transferase family protein | D3C88_08080 | Not Available | Negative | 1187211 - 1187837 | 23742.5 |
| serine-type d-ala-d-ala carboxypeptidase | D3C88_08085 | Not Available | Positive | 1188084 - 1189286 | 43673.5 |
| deor family transcriptional regulator | D3C88_08090 | Not Available | Negative | 1189333 - 1190091 | 28549.5 |
| undecaprenyl-diphosphate phosphatase | D3C88_08095 | Not Available | Negative | 1190149 - 1190745 | 22419.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





