Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-diketo-l-gulonate trap transporter small permease yiam | D3C88_00415 | Not Available | Positive | 67080 - 67547 | 17284.7 |
| 2,3-diketo-l-gulonate transporter large permease yian | D3C88_00420 | Not Available | Positive | 67352 - 68827 | 52976.3 |
| trap transporter substrate-binding protein | D3C88_00425 | Not Available | Positive | 68840 - 69826 | 36000.2 |
| carbohydrate kinase | D3C88_00430 | Not Available | Positive | 69830 - 69983 | 5696.8 |
| hypothetical protein | D3C88_00435 | Not Available | Negative | 69984 - 70293 | 12010.2 |
| yersiniabactin transcriptional regulator ybta | D3C88_00440 | Not Available | Negative | 70484 - 71443 | 35853.1 |
| response regulator | D3C88_00445 | Not Available | Negative | 71685 - 72118 | 16079.3 |
| hydroxyisourate hydrolase | D3C88_00450 | Not Available | Positive | 72251 - 72664 | 15509.5 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | D3C88_00455 | Not Available | Positive | 72773 - 73777 | 37447.0 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | D3C88_00460 | Not Available | Positive | 73778 - 74130 | 13197.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





