Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rata-like protein | D3C88_07795 | Not Available | Positive | 1144364 - 1147858 | 123958.0 |
| serine hydroxymethyltransferase | D3C88_07805 | Not Available | Positive | 1149388 - 1150288 | 32614.9 |
| dipeptide abc transporter atp-binding protein | D3C88_07810 | Not Available | Positive | 1150289 - 1150573 | 10642.7 |
| transporter | D3C88_07815 | Not Available | Negative | 1150603 - 1151874 | 47445.4 |
| hypothetical protein | D3C88_07820 | Not Available | Positive | 1152024 - 1152185 | 6349.85 |
| ncs2 family permease | D3C88_07825 | Not Available | Negative | 1152272 - 1152896 | 21353.5 |
| wgr domain-containing protein | D3C88_07830 | Not Available | Negative | 1152897 - 1155794 | 108464.0 |
| methionine--trna ligase | D3C88_07835 | Not Available | Negative | 1155935 - 1157968 | 76311.0 |
| iron-sulfur cluster carrier protein apbc | D3C88_07840 | Not Available | Positive | 1158100 - 1158784 | 24525.8 |
| glycerol kinase | D3C88_07845 | Not Available | Positive | 1158785 - 1159169 | 14447.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





