Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein phna | D3C88_07745 | Not Available | Negative | 1138042 - 1138377 | 12345.7 |
| hypothetical protein | D3C88_07750 | Not Available | Positive | 1138349 - 1138561 | 8087.11 |
| clamp-binding protein crfc | D3C88_07755 | Not Available | Positive | 1138780 - 1139958 | 44278.5 |
| abc transporter permease | D3C88_07760 | Not Available | Negative | 1139959 - 1140348 | 13683.4 |
| sugar abc transporter atp-binding protein | D3C88_07765 | Not Available | Negative | 1140373 - 1141416 | 38147.5 |
| septal ring lytic transglycosylase rlpa | D3C88_07770 | Not Available | Positive | 1141417 - 1141605 | 6889.13 |
| serine-type d-ala-d-ala carboxypeptidase | D3C88_07775 | Not Available | Positive | 1141745 - 1142292 | 19522.7 |
| formate dehydrogenase | D3C88_07780 | Not Available | Positive | 1142293 - 1142913 | 22599.0 |
| formate dehydrogenase-o iron-sulfur subunit | D3C88_07785 | Not Available | Positive | 1142926 - 1143828 | 33102.1 |
| formate dehydrogenase cytochrome b556 subunit | D3C88_07790 | Not Available | Positive | 1143825 - 1144363 | 20799.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





