Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tmao reductase system periplasmic protein tort | D3C88_07535 | Not Available | Positive | 1111196 - 1112224 | 37917.9 |
| two-component system response regulator torr | D3C88_07540 | Not Available | Negative | 1112197 - 1112889 | 26244.9 |
| pentaheme c-type cytochrome torc | D3C88_07545 | Not Available | Positive | 1113019 - 1114191 | 43612.8 |
| trimethylamine-n-oxide reductase tora | D3C88_07550 | Not Available | Positive | 1114191 - 1115358 | 43474.9 |
| serine endoprotease | D3C88_07555 | Not Available | Negative | 1115359 - 1115669 | 10698.8 |
| deoxyguanosinetriphosphate triphosphohydrolase | D3C88_07565 | Not Available | Negative | 1115799 - 1117316 | 59377.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | D3C88_07570 | Not Available | Positive | 1117400 - 1117620 | 7837.72 |
| type iv toxin-antitoxin system yeeu family antitoxin | D3C88_07575 | Not Available | Negative | 1117748 - 1118116 | 13596.2 |
| duf987 domain-containing protein | D3C88_07580 | Not Available | Negative | 1118190 - 1118411 | 8411.2 |
| dna repair protein radc | D3C88_07585 | Not Available | Negative | 1118480 - 1118553 | 2492.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





