Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | D3C88_07425 | Not Available | Negative | 1096587 - 1096721 | 5297.45 |
| molecular chaperone | D3C88_07430 | Not Available | Negative | 1096832 - 1096962 | 4724.93 |
| papc/fimd family outer membrane usher protein | D3C88_07435 | Not Available | Negative | 1097033 - 1099564 | 92300.1 |
| sulfite reductase subunit beta | D3C88_07445 | Not Available | Negative | 1099918 - 1100622 | 26854.1 |
| nadph-dependent assimilatory sulfite reductase flavoprotein subunit | D3C88_07450 | Not Available | Negative | 1100622 - 1101123 | 19459.9 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D3C88_07455 | Not Available | Negative | 1101124 - 1101488 | 13029.0 |
| hypothetical protein | D3C88_07460 | Not Available | Negative | 1101500 - 1102804 | 46446.2 |
| duf2620 domain-containing protein | D3C88_07465 | Not Available | Negative | 1102816 - 1103169 | 12479.5 |
| phosphotriesterase-related protein | D3C88_07470 | Not Available | Negative | 1103180 - 1103392 | 8059.81 |
| nadp-dependent malic enzyme | D3C88_07475 | Not Available | Positive | 1103393 - 1103863 | 17030.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





