Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase/penicillin-binding protein 1a | D3C88_07220 | Not Available | Negative | 1062701 - 1063364 | 23614.3 |
| hypothetical protein | D3C88_07225 | Not Available | Positive | 1063365 - 1063757 | 14015.8 |
| iron-sulfur cluster insertion protein erpa | D3C88_07230 | Not Available | Negative | 1063804 - 1064148 | 12101.2 |
| clc family h(+)/cl(-) exchange transporter | D3C88_07235 | Not Available | Negative | 1064230 - 1065651 | 50407.0 |
| glutamate-1-semialdehyde 2,1-aminomutase | D3C88_07240 | Not Available | Positive | 1065876 - 1067156 | 45433.8 |
| hypothetical protein | D3C88_07245 | Not Available | Negative | 1067191 - 1067437 | 8984.57 |
| type vi secretion system baseplate subunit tssg | D3C88_07250 | Not Available | Negative | 1067438 - 1068026 | 21983.0 |
| type vi secretion system baseplate subunit tssf | D3C88_07255 | Not Available | Negative | 1067990 - 1069294 | 50162.0 |
| transcriptional regulator tdca | D3C88_07260 | Not Available | Positive | 1069484 - 1070422 | 34598.9 |
| serine/threonine dehydratase | D3C88_07265 | Not Available | Positive | 1070515 - 1071504 | 35234.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





