Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-2-macroglobulin family protein | D3C88_07070 | Not Available | Negative | 1039787 - 1040784 | 36628.6 |
| type vi secretion system tube protein hcp | D3C88_07075 | Not Available | Positive | 1040785 - 1041172 | 14924.4 |
| aaa family atpase | D3C88_07080 | Not Available | Positive | 1041364 - 1042751 | 51420.9 |
| adenylosuccinate lyase | D3C88_07085 | Not Available | Positive | 1042752 - 1043107 | 13271.2 |
| two-component system response regulator phop | D3C88_07090 | Not Available | Positive | 1043276 - 1043947 | 25536.7 |
| two-component system sensor histidine kinase phoq | D3C88_07095 | Not Available | Positive | 1043947 - 1044850 | 34771.2 |
| isocitrate lyase | D3C88_07100 | Not Available | Positive | 1044855 - 1045550 | 25449.7 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | D3C88_07105 | Not Available | Positive | 1045599 - 1047323 | 67209.8 |
| iclr family transcriptional regulator | D3C88_07110 | Not Available | Negative | 1047340 - 1048164 | 29738.1 |
| methionine synthase | D3C88_07115 | Not Available | Positive | 1048364 - 1050120 | 63979.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





