Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination protein recr | D3C88_06965 | Not Available | Negative | 1028135 - 1028740 | 21964.3 |
| ybab/ebfc family nucleoid-associated protein | D3C88_06970 | Not Available | Negative | 1028740 - 1029069 | 12015.6 |
| dna polymerase iii subunit gamma/tau | D3C88_06975 | Not Available | Negative | 1029122 - 1030002 | 32219.5 |
| hypothetical protein | D3C88_06980 | Not Available | Negative | 1030003 - 1030274 | 10072.0 |
| hypothetical protein | D3C88_06985 | Not Available | Negative | 1030175 - 1030494 | 12614.8 |
| site-specific dna-methyltransferase | D3C88_06990 | Not Available | Positive | 1030495 - 1031073 | 21872.2 |
| holin | D3C88_06995 | Not Available | Positive | 1031141 - 1031334 | 7252.76 |
| formate hydrogenlyase maturation protein hych | D3C88_07000 | Not Available | Positive | 1031335 - 1031571 | 8995.92 |
| hydrogenase maturation peptidase hyci | D3C88_07005 | Not Available | Positive | 1031564 - 1032034 | 17013.5 |
| helix-turn-helix domain-containing protein | D3C88_07010 | Not Available | Positive | 1032270 - 1032689 | 15417.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





