Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l36 | D3C88_00310 | Not Available | Negative | 49860 - 49976 | 4364.59 |
| protein translocase subunit secy | D3C88_00315 | Not Available | Negative | 50008 - 51339 | 48514.7 |
| 50s ribosomal protein l15 | D3C88_00320 | Not Available | Negative | 51347 - 51781 | 14967.4 |
| 50s ribosomal protein l30 | D3C88_00325 | Not Available | Negative | 51785 - 51888 | 3725.59 |
| duf441 family protein | D3C88_00330 | Not Available | Negative | 51889 - 52227 | 11918.2 |
| hypothetical protein | D3C88_00335 | Not Available | Positive | 52349 - 52501 | 5476.76 |
| ybak/prolyl-trna synthetase associated domain-containing protein | D3C88_00340 | Not Available | Negative | 52502 - 53005 | 17850.7 |
| ggdef domain-containing protein | D3C88_00345 | Not Available | Negative | 53048 - 54538 | 56633.8 |
| ggdef domain-containing protein | D3C88_00350 | Not Available | Negative | 54719 - 56194 | 56051.6 |
| yeah/yhbh family protein | D3C88_00355 | Not Available | Negative | 56341 - 57614 | 48887.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





