Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate--ammonia ligase | D3C88_06790 | Not Available | Positive | 997932 - 998924 | 36733.7 |
| protein viaa | D3C88_06795 | Not Available | Negative | 998929 - 1000380 | 55942.7 |
| duf3763 domain-containing protein | D3C88_06800 | Not Available | Negative | 1000374 - 1001227 | 31962.7 |
| lysr family transcriptional regulator | D3C88_06805 | Not Available | Negative | 1001228 - 1001601 | 13831.6 |
| lysr family transcriptional regulator | D3C88_06810 | Not Available | Negative | 1001759 - 1002685 | 34314.5 |
| alpha/beta hydrolase | D3C88_06815 | Not Available | Positive | 1002842 - 1003762 | 33235.6 |
| nadh-dependent flavin oxidoreductase | D3C88_06820 | Not Available | Positive | 1003934 - 1005076 | 41854.2 |
| hypothetical protein | D3C88_06825 | Not Available | Positive | 1005550 - 1005651 | 3998.07 |
| 50s ribosomal protein l31 type b | D3C88_06835 | Not Available | Positive | 1006016 - 1006279 | 9920.71 |
| 50s ribosomal protein l36 | D3C88_06840 | Not Available | Positive | 1006279 - 1006419 | 5466.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





