Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3C88_06740 | Not Available | Positive | 990422 - 990565 | 5613.63 |
| amino acid transporter | D3C88_06745 | Not Available | Negative | 990639 - 991997 | 49554.6 |
| membrane protein yoei | D3C88_06750 | Not Available | Negative | 991987 - 992049 | 2241.66 |
| lysr family transcriptional regulator | D3C88_06755 | Not Available | Negative | 992264 - 992420 | 5535.45 |
| hypothetical protein | D3C88_06760 | Not Available | Positive | 992421 - 992580 | 6135.14 |
| duf4434 family protein | D3C88_06765 | Not Available | Positive | 992581 - 993471 | 33005.5 |
| omptin family outer membrane protease ompt | D3C88_06770 | Not Available | Positive | 994130 - 995083 | 35527.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | D3C88_06775 | Not Available | Negative | 995390 - 996410 | 37104.0 |
| fmn-binding protein mioc | D3C88_06780 | Not Available | Negative | 996789 - 997232 | 15808.5 |
| asnc family transcriptional regulator | D3C88_06785 | Not Available | Negative | 997322 - 997780 | 16888.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





