Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein gspb | D3C88_06640 | Not Available | Negative | 976677 - 976767 | 3586.28 |
| general secretion pathway protein gspa | D3C88_06645 | Not Available | Negative | 976769 - 978238 | 55412.3 |
| portal protein | D3C88_06650 | Not Available | Negative | 978253 - 979014 | 29347.9 |
| pbsx family phage terminase large subunit | D3C88_06655 | Not Available | Negative | 979016 - 980431 | 53031.1 |
| terminase | D3C88_06660 | Not Available | Negative | 980428 - 980868 | 16760.8 |
| duf2560 family protein | D3C88_06665 | Not Available | Negative | 980871 - 981113 | 9060.87 |
| rha family transcriptional regulator | D3C88_06670 | Not Available | Negative | 981414 - 981938 | 20065.4 |
| prepilin peptidase-dependent pilin | D3C88_06675 | Not Available | Positive | 982393 - 982833 | 15621.7 |
| type ii secretion system protein gspe | D3C88_06680 | Not Available | Positive | 982843 - 984228 | 50635.4 |
| type iv pilin biogenesis protein | D3C88_06685 | Not Available | Positive | 984218 - 984798 | 21707.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





