Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynfc family lipoprotein | D3C88_00260 | Not Available | Positive | 44676 - 45386 | 26515.3 |
| spermidine n1-acetyltransferase | D3C88_00265 | Not Available | Negative | 45389 - 45949 | 21902.3 |
| duf1283 domain-containing protein | D3C88_00270 | Not Available | Negative | 45984 - 46120 | 5180.99 |
| hydrogenase 3 membrane subunit | D3C88_00275 | Not Available | Negative | 46121 - 46430 | 11149.2 |
| hypothetical protein | D3C88_00280 | Not Available | Negative | 46433 - 47370 | 32688.7 |
| hypothetical protein | D3C88_00285 | Not Available | Positive | 47371 - 48064 | 25788.3 |
| dna-directed rna polymerase subunit alpha | D3C88_00290 | Not Available | Negative | 48065 - 48271 | 7565.14 |
| 30s ribosomal protein s4 | D3C88_00295 | Not Available | Negative | 48297 - 48917 | 23470.5 |
| 30s ribosomal protein s11 | D3C88_00300 | Not Available | Negative | 48951 - 49340 | 13845.7 |
| 30s ribosomal protein s13 | D3C88_00305 | Not Available | Negative | 49357 - 49713 | 13100.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





