Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulator with hipb | D3C88_05485 | Not Available | Positive | 817734 - 817934 | 7724.49 |
| hypothetical protein | D3C88_05490 | Not Available | Negative | 817953 - 818210 | 9874.65 |
| sdr family oxidoreductase | D3C88_05495 | Not Available | Positive | 818320 - 819102 | 29143.8 |
| fimbrial protein | D3C88_05505 | Not Available | Positive | 819878 - 820441 | 19113.5 |
| fimbrial chaperone protein fimc | D3C88_05510 | Not Available | Positive | 820794 - 821513 | 26555.3 |
| fimbrial biogenesis outer membrane usher protein | D3C88_05515 | Not Available | Positive | 821555 - 824206 | 96586.3 |
| type 1 fimbrial protein | D3C88_05520 | Not Available | Positive | 824220 - 824750 | 18894.5 |
| type 1 fimbrial protein | D3C88_05525 | Not Available | Positive | 824763 - 825266 | 18189.6 |
| fimbrial protein | D3C88_05530 | Not Available | Positive | 825326 - 826240 | 31953.2 |
| putative oxidoreductase | D3C88_05535 | Not Available | Positive | 826579 - 828858 | 83596.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





