Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D3C88_00155 | Not Available | Negative | 20464 - 20889 | 15211.3 |
| type vi secretion protein vask | D3C88_00160 | Not Available | Negative | 20890 - 21526 | 24015.3 |
| hypothetical protein | D3C88_00165 | Not Available | Negative | 21536 - 22753 | 47018.0 |
| paar domain-containing protein | D3C88_00170 | Not Available | Negative | 22674 - 22934 | 8846.61 |
| hypothetical protein | D3C88_00175 | Not Available | Negative | 23398 - 23691 | 11526.8 |
| hypothetical protein | D3C88_00180 | Not Available | Negative | 23660 - 24493 | 32021.6 |
| type vi secretion system tip protein vgrg | D3C88_00190 | Not Available | Negative | 26247 - 27393 | 41312.1 |
| carbohydrate kinase | D3C88_00195 | Not Available | Positive | 27394 - 28287 | 32491.7 |
| pyridoxal-phosphate dependent enzyme | D3C88_00200 | Not Available | Positive | 28314 - 28627 | 11301.5 |
| multidrug resistance protein emry | D3C88_00205 | Not Available | Negative | 28735 - 30273 | 56004.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





