Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit alpha | D3C88_05070 | Not Available | Negative | 763371 - 764912 | 55225.4 |
| f0f1 atp synthase subunit delta | D3C88_05075 | Not Available | Negative | 764925 - 765458 | 19377.3 |
| atp synthase subunit b | D3C88_05080 | Not Available | Negative | 765473 - 765943 | 17264.9 |
| atp synthase subunit c | D3C88_05085 | Not Available | Negative | 766005 - 766244 | 8256.71 |
| atp synthase subunit a | D3C88_05090 | Not Available | Negative | 766291 - 767106 | 30314.1 |
| atp synthase i | D3C88_05095 | Not Available | Negative | 767115 - 767495 | 13632.5 |
| ribosomal rna small subunit methyltransferase g | D3C88_05100 | Not Available | Negative | 768112 - 768735 | 23432.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | D3C88_05105 | Not Available | Negative | 768799 - 769707 | 33866.2 |
| duf2300 domain-containing protein | D3C88_05110 | Not Available | Negative | 769708 - 771033 | 48891.1 |
| hypothetical protein | D3C88_05115 | Not Available | Negative | 771034 - 771653 | 22989.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





