Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | D3C88_04910 | Not Available | Positive | 740537 - 741040 | 17918.5 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | D3C88_04915 | Not Available | Positive | 741054 - 741500 | 16398.8 |
| hypothetical protein | D3C88_04920 | Not Available | Negative | 741501 - 741646 | 5450.6 |
| duf2583 domain-containing protein | D3C88_04925 | Not Available | Positive | 741924 - 742202 | 10486.9 |
| sodium-independent anion transporter | D3C88_04930 | Not Available | Negative | 742257 - 743936 | 59428.8 |
| ribose-phosphate pyrophosphokinase | D3C88_04940 | Not Available | Negative | 744061 - 745008 | 34220.3 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | D3C88_04950 | Not Available | Negative | 745159 - 745522 | 13553.2 |
| type ii secretion system protein gspf | D3C88_04955 | Not Available | Negative | 745523 - 746557 | 38176.2 |
| type ii secretion system protein gspe | D3C88_04960 | Not Available | Negative | 746557 - 747122 | 20430.6 |
| siderophore enterobactin receptor fepa | D3C88_04965 | Not Available | Positive | 747123 - 748706 | 58334.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





