Micromonospora radicis strain AZ1-13 83

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora radicis strain AZ1-13 83 is characterized by the presence of flagella, which may facilitate motility and environmental adaptation. This strain possesses a single replicon, indicating a streamlined genetic organization that could influence its replication and stability in various environments. The strain is cataloged under the accession number QXEC00000000.1, providing a reference for further research and characterization. The presence of flagella in Micromonospora radicis strain AZ1-13 83 suggests potential advantages in accessing nutrient-rich niches or evading unfavorable conditions in its habitat. As a member of the Micromonospora genus, this strain is part of a group known for their ability to produce bioactive compounds, which may have implications for biotechnological applications, particularly in pharmaceuticals and agriculture. In an ecological context, the motility conferred by flagella could enhance the strain's ability to colonize diverse environments, potentially contributing to soil health and nutrient cycling. This capability might also allow Micromonospora radicis strain AZ1-13 83 to interact with other microorganisms and plants, playing a role in symbiotic relationships or influencing microbial community dynamics. Overall, the traits of this strain highlight its adaptive strategies and potential ecological significance.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora radicis
Strainstrain AZ1-13 83

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora radicis strain AZ1-13 83, whole genome shotgun

Gene Summary

Adenine Count

836350 bp

Thymine Count

839336 bp

Guanine Count

2143142 bp

Cytosine Count

2144395 bp

Genome Length

5963223 bp

Protein-coding Genes

5125 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lrp/asnc family transcriptional regulatorD2L64_00815Not AvailableNegative178131 - 17863718524.9
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaD2L64_00820Not AvailablePositive178742 - 17990842708.1
alpha-ketoacid dehydrogenase subunit betaD2L64_00825Not AvailablePositive179908 - 18092436254.4
2-oxo acid dehydrogenase subunit e2D2L64_00830Not AvailablePositive180921 - 18239049999.9
l,d-transpeptidaseD2L64_00835Not AvailablePositive182662 - 18392144897.8
anti-sigma factor antagonistD2L64_00840Not AvailablePositive184130 - 18448012669.7
fkbp-type peptidyl-prolyl cis-trans isomeraseD2L64_00845Not AvailableNegative184541 - 18492113188.7
doxx family membrane proteinD2L64_00850Not AvailableNegative185242 - 18580519930.4
cobalamin-binding proteinD2L64_00855Not AvailableNegative185984 - 18670325762.9
duf2726 domain-containing proteinD2L64_00860Not AvailablePositive186822 - 18768230751.8

Displaying genes 161 – 170 of 5182 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.