Vibrio cholerae strain CHNf1

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain CHNf1 is a Gram-negative, rod-shaped bacterium recognized for its pathogenicity in humans. It exhibits a facultative anaerobic metabolism, primarily functioning as a heterotroph. This strain possesses flagella, which may facilitate its motility, although it is noted to be non-motile in behavior. With an optimal growth temperature of 20°C, it thrives in mesophilic conditions. The bacterium is free-living and is found in various habitats, including aquatic environments where it can interact with multiple hosts such as Homo sapiens, Mollusca, Mammalia, and the shrimp species Penaeus vannamei. CHNf1 can be associated with a wide range of health issues, including cholera, pneumonia, gastrointestinal infections, and various soft tissue infections. Notably, it is linked to severe conditions such as septicemia, necrotizing fasciitis, and clinical cholera, which can contribute to outbreaks of diarrheal disease. Given its pathogenic nature, V. cholerae strain CHNf1 serves as a significant concern in public health, particularly in regions susceptible to cholera outbreaks. The strain's ability to thrive in aquatic environments and its multiple biotic relationships underscore its ecological adaptability and potential for transmission, highlighting the importance of monitoring environments where it may proliferate, especially in the context of human exposure.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
Strainstrain CHNf1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae strain CHNf1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Mollusca, Mammalia
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio cholerae strain CHNf1 Scaffold149, whole genome shotgun

Gene Summary

Adenine Count

1053789 bp

Thymine Count

1042475 bp

Guanine Count

934263 bp

Cytosine Count

953469 bp

Genome Length

3984061 bp

Protein-coding Genes

3529 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1425 domain-containing proteinD2B32_02730Not AvailableNegative586467 - 58685614371.1
hypothetical proteinD2B32_02735Not AvailableNegative586856 - 58827452065.9
purine nucleoside phosphoramidaseD2B32_02740Not AvailableNegative588287 - 58863713006.9
methyl-accepting chemotaxis proteinD2B32_02745Not AvailablePositive588870 - 59088873776.4
duf1887 family proteinD2B32_02750Not AvailablePositive591058 - 59220943602.9
fatty acid metabolism transcriptional regulator fadrD2B32_02755Not AvailableNegative592444 - 59328331999.5
na+/h+ antiporter nhabD2B32_02760Not AvailablePositive593928 - 59552057646.8
disulfide bond formation protein bD2B32_02765Not AvailablePositive595600 - 59612119349.2
dna translocase ftskD2B32_02770Not AvailableNegative596197 - 599079105927.0
leucine-responsive transcriptional regulator lrpD2B32_02775Not AvailableNegative599257 - 59975118790.7

Displaying genes 571 – 580 of 3647 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CholeraCausesPMC10103850
Ear infectionsCausesPMC10103850
Wound infectionsCausesPMC10103850
SepticaemiaCausesPMC10103850
Gastrointestinal infectionsCausesPMC10103850
Necrotizing fasciitisCausesPMC10103850
VibriosisCausesPMC10472736
PneumoniaCausesPMC12801787
GastroenteritisCausesPMC12801787
SinusitisCausesPMC12801787

Displaying health effects 1 – 10 of 38 in total