Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | strain CHNf1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1053789 bp
Thymine Count
1042475 bp
Guanine Count
934263 bp
Cytosine Count
953469 bp
Genome Length
3984061 bp
Protein-coding Genes
3529 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein hisp | D2B32_02580 | Not Available | Negative | 547995 - 548765 | 28603.8 |
| duf3360 family protein | D2B32_02585 | Not Available | Positive | 549470 - 551023 | 55980.7 |
| formate c-acetyltransferase | D2B32_02590 | Not Available | Positive | 551289 - 553565 | 84656.8 |
| lipid a deacylase lpxr family protein | D2B32_02595 | Not Available | Positive | 553701 - 554729 | 38146.7 |
| methyl-accepting chemotaxis protein | D2B32_02600 | Not Available | Negative | 554747 - 556627 | 68148.3 |
| chemotaxis protein | D2B32_02605 | Not Available | Negative | 556549 - 556719 | 6637.03 |
| pyruvate formate lyase 1-activating protein | D2B32_02610 | Not Available | Positive | 556960 - 557700 | 28112.6 |
| hypothetical protein | D2B32_02615 | Not Available | Positive | 557766 - 558428 | 25346.4 |
| yfbu family protein | D2B32_02620 | Not Available | Positive | 558549 - 559049 | 19913.0 |
| prka family serine protein kinase | D2B32_02625 | Not Available | Positive | 559290 - 561224 | 74117.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |






