Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | strain CHNf1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1053789 bp
Thymine Count
1042475 bp
Guanine Count
934263 bp
Cytosine Count
953469 bp
Genome Length
3984061 bp
Protein-coding Genes
3529 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3413 domain-containing protein | D2B32_17695 | Not Available | Negative | 3836064 - 3837866 | 68403.5 |
| duf1414 domain-containing protein | D2B32_17700 | Not Available | Negative | 3837901 - 3838116 | 7619.18 |
| nucleoid-associated protein yejk | D2B32_17705 | Not Available | Positive | 3838201 - 3839202 | 38113.0 |
| cytidine deaminase | D2B32_17710 | Not Available | Negative | 3839738 - 3841258 | 57245.8 |
| xre family transcriptional regulator | D2B32_17715 | Not Available | Negative | 3841379 - 3841696 | 11770.5 |
| hypothetical protein | D2B32_17720 | Not Available | Positive | 3841800 - 3842330 | 20769.8 |
| hypothetical protein | D2B32_17730 | Not Available | Positive | 3843384 - 3843632 | 8524.86 |
| patatin | D2B32_17735 | Not Available | Positive | 3843641 - 3844708 | 39248.9 |
| Trna-thr | Not Available | Not Available | Positive | 3845706 - 3845781 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3845795 - 3845869 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |






